一、基本信息

男，教授，博士生导师&硕士生导师，中共党员

二、联系方式

工作单位：海南大学热带作物学院

联系方式：feichen@hainanu.edu.cn

联系电话：18061284509

地址：海南省海口市美兰区人民大道58号海南大学

邮政编码：570228

三、教育经历

2014.09-2016.05，美国田纳西大学，联合培养博士，导师：Feng Chen 教授

2011.09-2016.06，南京农业大学，果树学，博士，导师：程宗明教授
2007.09-2011.06，南京农业大学，生物技术，本科

四、科研与学术工作经历

2021.12-至今，海南大学，热带作物学院，教授

2019.05-2021.11，南京农业大学，园艺学院，讲师
2016.06-2019.04，福建农林大学海峡联合研究院，科研助理

五、科研项目

主持国家自然科学基金面上项目、青年项目，中央高校基本科研业务费，国家重点实验室开放基金，福建省面上项目等多项，参与国家自然科学基金重点项目、青年项目等多项。

科研方向：

（1）园艺作物遗传育种和应用

使用高通量多组学技术和分子生物学技术，解析花的起源、花器官形态建成、花香、花色、性别决定、开花时间、花的节律钟、抗逆性等的分子基础和进化特征；基于杂交育种、多倍体育种、分子育种等手段选育新品种；种质资源圃建设；园艺产品的开发和园林景观应用。

（2）生物大数据研究

随着核酸测序、蛋白测序、代谢检测、表型检测等各种高通量技术的不断开发应用，海量的生物数据急需存储、可视化以及高效应用，基于此开发生物数据库，并研发各类组学相关工具，为进化生物学研究和园艺植物育种提供便利。

六、代表性成果

（一）发表论文

2021

(41) Dong S, Liu M, Liu Y, Chen F, Yang T, Chen L, Zhang X, Guo X, Fang D, Li L, Deng T, Yao Z, Lang X, Gong Y, Wu E, Wang Y, Shen Y, Gong X, Liu H, ZHang S. The genome of Magnolia biondii Pamp. provides insights into the evolution of Magnoliales and biosynthesis of terpenoids. Horticulture Research, 2021, 8:38

(40) Wang X, Gao Y, Wu X, Wen X, Li D, Zhou H, Li Z, Liu B, Wei J, Chen F, Chen F, Zhang C, Zhang L, Xia Y. High‐quality evergreen azalea genome reveals tandem duplication‐facilitated low‐altitude adaptability and floral scent evolution. Plant Biotechnology Journal 2021, 19:2544-2560.

(39) Lei X, Wang Y, Zhou Y, Chen Y, Chen H, Zou Z, Ma Y, Chen F*, Fang W*. TeaPGDB: Tea Plant Genome Database. Beverage Plant Research. 2021, 1:5.

(38) Wang Y#, Chen F#*, Ma Y, Zhang T, Sun P, Lan M, Li F, Fang W*. An ancient whole-genome duplication event and its contribution to flavor compounds in the tea plant (Camellia sinensis). Horticulture Research 2021, 8:176.

(37) Chen F, Su L, Hu S, Xue J, Liu H, Liu G, Jiang Y, Du J, Qiao Y, Fan Y, Liu H, Yang Q, Lu W, Shao Z, Zhang J, Zhang L, Chen F, Cheng Z. A chromosome-level genome assembly of rugged rose (Rosa rugosa) provides insights into its evolution, ecology, and floral characteristics. Horticulture Research 2021, 8: 141.

2020

(36) Xue J, Dong S, Wang M, Song T, Zhou G, Li Z, Van de Peer Y, Shao Z, Wang W, Chen M, Zhang Y, Sun X, Chen H, Zhang Y, Zhang S, Chen F, Zhang L, Cox C, Liu Y*, Wang Q, Hang Y. Mitochondrial genes from 18 angiosperms fill sampling gaps for phylogenomic inferences of the early diversification of flowering plants Journal of Systematics and Evolution 2020

(35) Chang X, Xie S, Wei L, Lu Z, Chen Z, Chen F, Lai Z, Lin Z, Zhang L*. Origins and stepwise expansion of R2R3-MYB transcription factors for the terrestrial adaptation of plants. Frontiers in Plant Science 2000, 11.

(34) Li Y, Liu G, Ma L, Liu T, Zhang C, Xiao D, Zheng H, Chen F, Hou X*. A chromosome-level reference genome of non-heading Chinese cabbage [Brassica campestris (syn. Brassica rapa) ssp. chinensis] 2020, 7:212.

(33) Chen, Xuequn; Tong, Chaobo ; Zhang, Xingtan; Dong, Wei; Hu, Ming; Song, Aixia; Chen, Fei; Wang, Youping; Tu, Jinxing; Liu, Shengyi; Tang, Haibao; Zhang, Liangsheng A high-quality Brassica napus genome reveals expansion of transposable elements, subgenome evolution and disease resistance. Plant Biotechnology Journal 2020, 19(3):615-630.

(32) Zhang L#*, Wu S#, Chang X, Wang X, Zhao Y, Xia Y, Trigiano RN, Jiao Y*, Chen F*. The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress. Plant, Cell & Environment 2020.

(31) Tang H, Zhang L, Chen F, Zhang X, Chen F, Ma H, Van de Peer Y. Nymphaea colorata (Blue-Petal Water lily). Trends in Genetics 2020.

(30) Cover story: Lan Mo, Junhao Chen, Chen F, Qiangwei Xu, Zaikang Tong, Huahong Huang, Renhui Dong, Xiongzhen Lou, Erpei Lin*Induction and characterization of polyploids from seeds of Rhododendron fortunei Lindl. . Journal of Integrative Agriculture 2020, 19(2-12).

(29) Zhang L.*, Shen F, Chen F, Lin Z. Origin and evolution of the 2019 novel coronavirus. Clinical Infectious Diseases ciaa112(2020).

2019

(28) Zhang L.#*, Chen F#, Zhang X#, et al. The water lily genome and the early evolution of flowering plants. Nature 577, 79-84(2020). ESI highly cited paper

######This article is highlighted by: Lyu, J. Encoding beauty. Nature Plants (2020). https://doi.org/10.1038/s41477-019-0587-5

(27) Chen F*, Song Y, Li X, Chen J, Mo L, Zhang X, Lin Z, Zhang L*. Genome sequences of horticultural plants: past, present, and future. Horticulture Research 2019, 6:112.

(26) Chen F, Chen J, Wang Z, Zhang J, Lin M, Song Y, Zhang L. Genomics: cracking the mysteries of walnuts. Journal of Genetics 2019, 98:33.

2018

(25) Yang X, Yue Y, Li H, Ding W, Chen G, Shi T, Chen J, Park MS*, Chen F*, Wang L*. The chromosome-level quality genome provides insights into the evolution of the biosynthesis genes for aroma compounds of Osmanthus fragrans. Horticulture Research 2018, 5:72

(24) Chen J, Zhang J, Lin M, Wang Z, Zhang L, Chen F*. MGH: a genome hub for the medicinal plant maca (Lepidium meyenii). Database, 2018, bay113.

(23) Yu C, Qiao G, Qiu W, Yu D, Zhou S, Shen Y, Yu G, Jiang J, Han X, Liu M, Zhang L, Chen F*, Chen Y*, Zhuo R*. Molecular breeding of water lily: engineering cold stress tolerance into tropical water lily. Horticulture Research2018, 5:73

(22) Dong S, Zhao C, Chen F, Liu Y, Zhang S, Wu H, Zhang L*, Liu Y*.The complete mitochondrial genome of the early flowering plant Nymphaea colorata is highly repetitive with low recombination. BMC Genomics 19: 614.

(21) Xu M#(Co-first), Chen F#(Co-first), Qi S, Zhang L, Wu S. Loss or duplication of key regulatory genes coincides with environmental adaptation of stomatal complex in Nymphaea colorata and Kalanchoe laxiflora. Horticulture Research 2018, 5: 42.

(20) Dong W, Vannozzi A, Chen F, Liangsheng Zhang. MORC Domain Definition and Evolutionary Analysis of the MORC Gene Family in Green Plants . Genome Biology and Evolution 2018, 10:1730-1744

(19) Chen F*, Zhang J, Chen J, Li X, Dong W, Hu J, Lin M, Liu Y, Wang Z, Zhang L*. realDB: a genome and transcriptome resource for the red algae (phylum Rhodophyta). Database doi:10.1093/database/bay072

(18) Chen F, Hu Y, Vannozzi A, Wu K, Cai H, Qin Y, Mullis A, Lin Z, Zhang L*. The WRKY transcription factor family in model plants and crops. Critical Reviews in Plant Sciences 2018. DOI: 10.1080/07352689.2018.1441103. ESI highly cited paper

(17) Chen F, Zhang L, Lin Z, Cheng Z. Identification of a novel fused gene family implicates convergent evolution in eukaryotic calcium signaling. BMC Genomics. 2018. 19:306

(16) Chen F, Dong W, Zhang J, Guo X, Chen J, Wang Z, Lin Z, Tang H, Zhang L. The sequenced angiosperm genomes and genome databases. Frontiers in Plant Sciences. 2018. 9：418.

2017

(15) Chen F, Liu X, Yu C, Chen Y, Tang H, Zhang L. Water lilies as emerging models for Darwin’s abominable mystery. Horticulture Research. 4,17051(2017)

(14) Chen F, Zhang X, Liu X, Zhang L, Evolutionary analysis of MIKCc-type MADS-box genes in gymnosperms and angiosperms. Frontiers in Plant Sciences. 2017, 8: 895

(13) Chen F, Zhang L, Cheng Z, The calmodulin fused kinase novel gene family is the major system in plants converting Ca2+ signals to protein phosphorylation responses. Scientific Reports. 2017, 7: 4127

2016

(12) Zhu K, Chen F, Chen X, Hewezi T, Cheng Z. Evolution of an intron-poor cluster of the CIPK gene family and expression in response to drought stress in soybean. Scientific Reports, 2016, 6:28225

(11) Liangsheng Zhang (Co-first), Chen F (Co-first), Guo-Qiang Zhang, Yong-Qiang Zhang, Shance Niu, Jin-Song Xiong, Zhenguo Lin, Zong-Ming (Max) Cheng, Zhong-Jian Liu. Origin and mechanism of crassulacean acid metabolism in orchids as implied by comparative transcriptomics and genomics of the carbon fixation pathway. The Plant Journal 2016, 86: 175-185.

(10) GQ Zhang, … Chen F,… et al. The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution. Scientific Reports 6, 19029. ESI highly cited paper

2014

(9) Wang G, Lovato A, Liang Y, Wang M, Chen F, Tornielli GB, Polverari A, Validation by isolation and expression analyses of the mitogen-activated protein kinase gene family in the grapevine (Vitis vinifera L.) Australian Journal of Grape and Wine Research, 2014

(8) Yinghai Liang, Bin Cai, Chen F, Gang Wang, Min Wang, Yan Zhong, Zong-Ming (Max) Cheng. (2014) Construction and validation of a gene co-expression network in grapevine (Vitis vinifera. L.) Horticulture Research 1:14040

(7) Liu J, Chen N, Chen F, Cai B, Dal Santo S, Tornielli G, Pezzotti M, and Cheng Z. (2014) Genome-wide analysis and expression profile of the bZIP transcription factor gene family in grapevine (Vitis vinifera). BMC Genomics, 15:281

2013

(6) Cai T, Ye X, Ma Y, Wang X, Chen F, Cheng Z. Over-expression of 1-aminocyclopropane-1carboxylic acid oxidase genes (ACO) from Vitis vinifera in tomato (Solanum lycopersicum) and its effects on ethylene release rates Journal of Agricultural Biotechnology 21(9):1037-1044 (2013)

(5) Liang Y, Chen F, Wang G, Wang M, Feng G, Cheng ZM. Bioinformatics identification, analysis of gene structure and expression characters on lineage-specific genes of grapevine Journal of Nanjing Agriculturalersity University 36 (6): 19-24 (2013)

(4) Chen F, Yin H, Liang Y, Cai B. Evolution of Calcium-dependent Protein Kinase Gene Family in Apple (Malus domestica) Acta Agriculturae Jiangxi 2013, 25(9): 15-20.

(3) Yin H, Cai B, Li C, Chen F. Genome-wide analysis of bHLH transcription factor family in grape. Acta Agriculturae Jiangxi 2013, 25(9): 1-6.

(2)[Meeting abstract] Zong-Ming Cheng, Chen F, Fasoli M, Tornielli GB, Dal Santo S, Pezzotti M, et al. (2013) The evolutionary history and diverse physiological roles of the grapevine calcium-dependent protein kinase gene family. HortScience, 48(9): S172-S172.

(1) Chen F, Fasoli M, Tornielli GB, Dal Santo S, Pezzotti M, et al. (2013) The evolutionary history and diverse physiological roles of the grapevine calcium-dependent protein kinase gene family. PLoS ONE 8(12): e80818.

（二）教学及人才培养

本科生：植物基因组及蛋白质组学，本科毕业论文

研究生：现代农业发展与实践案例

学术兼职

执行编辑：Tropical Plants

副主编：Horticulture Research, Ornamental Plant Research

青年编委：The Innovation

编委会成员：Horticultural Plant Journal, BMC Genomics

Review editor：Frontiers in Genetics

国家自然科学基金，评议人；

海南省自然科学基金，评议人

 其他

2019年，南京农业大学，年度考核优秀；

2016年，福建农林大学基因组中心，年度考核优秀；

2019年，参与获得浙江省林业局林学会第十九届科技兴林奖，二等，荷花和睡莲新品种选育及园林应用技术。